CDS

Accession Number TCMCG016C22402
gbkey CDS
Protein Id OMO61172.1
Location join(2791..2856,3787..3891,3974..4054,4152..4283,4377..4421,4917..5056,5182..5272,6945..7072,7146..7281,7386..7516,8040..8165,8266..8321,9151..9266,10049..10133,10234..10337,11109..11186)
Organism Corchorus capsularis
locus_tag CCACVL1_23713

Protein

Length 539aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01013552.1
Definition hypothetical protein CCACVL1_23713 [Corchorus capsularis]
Locus_tag CCACVL1_23713

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAAGCTGCGGAGAGCTGGCAAAGTTGGTGAGTTTGTGAGTGTCTTTGTAAATGAAAAGCAGCTGTGCGTTTATATTGCTTCTGATGGAGGTCGAGTTTGTCGACCCTTGGTAATAGCTGACAAGGGAATATCAAGGATCAAAGAACACCATATGAAGGAGTTGTTGGATGGAGTCCGTAGTTTTGACGACTTCTTACGTCATGGACTGATAGAGTATCTTGATGTCAATGAGGAGAACAATGCTCTGATTGCTTTATATGAAGGAGAGGCTACGCCTGATACAACCCATATTGAGATAGAGCCTTTCACGATCTTAGGTGTTTGTGCTGGGCTAATTCCGTATCCTCATCATAATCAGTCACCAAGAAATACCTATCAGTGTGCTATGGGGAAGCAAGCAATGGGAAATATTGCATATAACCAGGTTGGATATGATAAGCTTGGAGCTGGTCAGAATGCAACTGTTGCTGTGATGAGTTATAGTGGTTATGACATAGAGGATGCAATTGTGATGAACAAATCTTCTCTTGACCGTGGTTTTGGTCGTTGTATTGTGATGAAAAGGTATTCAGGTGTTATTCAAAAATATGACAATGGTGCGTCTGACAGAATACTTAGGCCGCAGAGAACGGGAATGGGTTCAGAAAAAATGCAGATTTTAGACGATGATGGAATTGCTGCTCCTGGGGAGATTATTAGACCAGATGATGTCTACATTAATAAGCAGTCCCCAGTTATTACAAGAGGATCTCGCATAACTTCTGCAGAACCTCTACCGGATAATGCATATAGATCTGCTAGGCAAACATACAAAGGTCCTGATGGAGAAACATGTGTGGTGGATAGAGTTGCTCTTTCCTCTGATAGGAACGAGAATCCATGTATCAAAATTTTAATACGCCATACGCGTCGACCTGAGGTTGGTGACAAATTTAGTAGTAGACATGGCCAGAAAGGTGTTTGTGGTACTATCATTCAGCAGGAAGATTTCCCGTTTTCTGAGCGTGGAATTTGTCCTGATTTAATTATGAATCCTCATGGTTTTCCAAGTCGAATGACTGTAGGTAAGATGATAGAGCTTCTTGGAGGCAAAGCTGGAGTTTCATGTGGTAGGTTCCATTATGGTAGTGCCTTTGGTGAGCCTAGCGGTCATGCAGATAAGGTTGAAGCTATAAGTGAAACGCTCATCAAGCATGGTTTTAGCTACAATGGAAAGGACTTCCTTTATTCAGGTATCACTGGTGCTCCATTGCAAGCATATATTTTTATGGGACCAATTTACTACCAGAAATTAAAGCATATGGTTAGATTGCAGTTCTTTATGCTAGCATACGTCTTTGATGATCCTGTCCTTGACAAAATGCATGCCAGAGGTCCTGGGCCTCGGGTTATGCTAACCAGACAACCTACAGAAGGAAAAGCTCGAAACGGAGGGTTACGAGTAGGAGAAATGGAACGTGATTGTCTAATTGCTTATGGTGCTAGCATGTTAATTTTTGAGCGCCTGATGAAATCCAGTGATCCTTTTGAAGTTCAGGACCTAGGGCGTTTGCTTATTGAGGATCATTATTTTTATGCTGCTTGTGGATGCCATAAGTGTGACACGGTGCTTTAG
Protein:  
MRKLRRAGKVGEFVSVFVNEKQLCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDDFLRHGLIEYLDVNEENNALIALYEGEATPDTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSGVIQKYDNGASDRILRPQRTGMGSEKMQILDDDGIAAPGEIIRPDDVYINKQSPVITRGSRITSAEPLPDNAYRSARQTYKGPDGETCVVDRVALSSDRNENPCIKILIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVEAISETLIKHGFSYNGKDFLYSGITGAPLQAYIFMGPIYYQKLKHMVRLQFFMLAYVFDDPVLDKMHARGPGPRVMLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLIFERLMKSSDPFEVQDLGRLLIEDHYFYAACGCHKCDTVL